Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm43483-201ENSMUST00000196724 2860 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm7312-201ENSMUST00000118798 469 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm7079-201ENSMUST00000119726 171 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm12267-201ENSMUST00000121609 761 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm5809-201ENSMUST00000121854 529 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm8458-201ENSMUST00000196658 819 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm33952-201ENSMUST00000197795 408 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 AC136376.1-201ENSMUST00000228496 950 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 AC154841.1-201ENSMUST00000227263 1479 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Robo2-210ENSMUST00000226478 8059 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm14895-201ENSMUST00000121858 1361 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Gm45548-201ENSMUST00000210076 3167 ntBASIC4.32□□□□□ -1.72
NipblQ6KCD5 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NipblQ6KCD5 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm44660-201ENSMUST00000207134 2465 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm15425-201ENSMUST00000119013 2711 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm11972-201ENSMUST00000118514 389 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm12189-201ENSMUST00000119779 912 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm11385-201ENSMUST00000121513 570 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm24692-201ENSMUST00000157761 146 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Mir5710-201ENSMUST00000176884 69 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Mir6400-201ENSMUST00000184870 92 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm28428-201ENSMUST00000188886 697 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm9687-201ENSMUST00000189312 602 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm37882-201ENSMUST00000195254 196 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm4874-201ENSMUST00000203589 691 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm45539-201ENSMUST00000210313 428 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm7887-201ENSMUST00000056948 537 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm38224-201ENSMUST00000191648 2100 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm12115-201ENSMUST00000119969 447 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm25430-201ENSMUST00000157614 289 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm37341-201ENSMUST00000194680 371 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm37308-201ENSMUST00000194684 100 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm19368-201ENSMUST00000221258 4424 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm43503-201ENSMUST00000200033 3408 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm23485-201ENSMUST00000104181 155 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm6071-201ENSMUST00000119561 440 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.31□□□□□ -1.72
NipblQ6KCD5 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NipblQ6KCD5 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms