Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Cux1P53564 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Cux1P53564 Gm12850-201ENSMUST00000119210 436 ntBASIC8.46□□□□□ -1.05
Cux1P53564 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cux1P53564 Gm4845-201ENSMUST00000179202 562 ntBASIC8.46□□□□□ -1.05
Cux1P53564 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC8.46□□□□□ -1.05
Cux1P53564 Rnu3a-202ENSMUST00000196710 213 ntBASIC8.46□□□□□ -1.05
Cux1P53564 Gm42542-201ENSMUST00000197978 268 ntBASIC8.46□□□□□ -1.05
Cux1P53564 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC8.46□□□□□ -1.05
Cux1P53564 n-R5s62-201ENSMUST00000082780 96 ntBASIC8.46□□□□□ -1.05
Cux1P53564 Mir17-201ENSMUST00000083574 84 ntBASIC8.46□□□□□ -1.05
Cux1P53564 Rnu3a-201ENSMUST00000083936 214 ntBASIC8.46□□□□□ -1.05
Cux1P53564 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Cux1P53564 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC8.46□□□□□ -1.06
Cux1P53564 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.46□□□□□ -1.06
Cux1P53564 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Cux1P53564 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC8.46□□□□□ -1.06
Cux1P53564 Gm14367-201ENSMUST00000119214 1497 ntBASIC8.46□□□□□ -1.06
Cux1P53564 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cux1P53564 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cux1P53564 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cux1P53564 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cux1P53564 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cux1P53564 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cux1P53564 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cux1P53564 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cux1P53564 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC8.46□□□□□ -1.06
Cux1P53564 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Cux1P53564 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Cux1P53564 n-R5s82-201ENSMUST00000104213 109 ntBASIC8.45□□□□□ -1.06
Cux1P53564 Gm15187-201ENSMUST00000122329 264 ntBASIC8.45□□□□□ -1.06
Cux1P53564 Gm23631-201ENSMUST00000175291 123 ntBASIC8.45□□□□□ -1.06
Cux1P53564 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC8.45□□□□□ -1.06
Cux1P53564 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC8.45□□□□□ -1.06
Cux1P53564 AC123064.1-201ENSMUST00000218950 406 ntBASIC8.45□□□□□ -1.06
Cux1P53564 n-R5s88-201ENSMUST00000083173 118 ntBASIC8.45□□□□□ -1.06
Cux1P53564 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Gm44424-201ENSMUST00000203438 1826 ntBASIC8.45□□□□□ -1.06
Cux1P53564 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Cux1P53564 AC159244.3-201ENSMUST00000222887 3153 ntBASIC8.45□□□□□ -1.06
Cux1P53564 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Cux1P53564 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Cux1P53564 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Cux1P53564 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cux1P53564 Mir1946b-201ENSMUST00000157853 133 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Gm23513-201ENSMUST00000158181 133 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC8.44□□□□□ -1.06
Cux1P53564 Gm18127-201ENSMUST00000208479 725 ntBASIC8.44□□□□□ -1.06
Cux1P53564 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.44□□□□□ -1.06
Cux1P53564 AC131745.1-201ENSMUST00000223660 330 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Cux1P53564 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Cux1P53564 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC8.44□□□□□ -1.06
Cux1P53564 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 AC112972.2-201ENSMUST00000228702 2210 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Gm20519-201ENSMUST00000173684 359 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.44□□□□□ -1.06
Cux1P53564 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Gm43018-201ENSMUST00000198075 1275 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cux1P53564 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Cux1P53564 Gm5321-201ENSMUST00000072050 447 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Gm4963-201ENSMUST00000072718 378 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC8.44□□□□□ -1.06
Cux1P53564 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8.43□□□□□ -1.06
Cux1P53564 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 Gm10845-202ENSMUST00000228217 3389 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms