Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm8501-201ENSMUST00000117684 432 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm13493-201ENSMUST00000120318 493 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm11358-201ENSMUST00000122310 373 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm26424-201ENSMUST00000122530 104 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.34□□□□□ -1.39
Shmt1P50431 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm22636-201ENSMUST00000158142 275 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm25413-201ENSMUST00000158544 312 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm18199-201ENSMUST00000173820 835 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Shmt1P50431 Mir7674-201ENSMUST00000184964 63 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm44494-201ENSMUST00000196760 129 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm36378-201ENSMUST00000201709 388 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm19900-201ENSMUST00000207285 576 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm44984-201ENSMUST00000207802 394 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 AL772397.1-201ENSMUST00000216707 606 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC6.34□□□□□ -1.39
Shmt1P50431 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Shmt1P50431 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Shmt1P50431 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Shmt1P50431 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.34□□□□□ -1.39
Shmt1P50431 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Shmt1P50431 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Shmt1P50431 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Shmt1P50431 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Shmt1P50431 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Shmt1P50431 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Shmt1P50431 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Shmt1P50431 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Shmt1P50431 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Shmt1P50431 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.4
Shmt1P50431 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.34□□□□□ -1.4
Shmt1P50431 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Shmt1P50431 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Shmt1P50431 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Shmt1P50431 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.33□□□□□ -1.4
Shmt1P50431 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Shmt1P50431 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm8858-201ENSMUST00000118259 342 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm16471-201ENSMUST00000121940 618 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm14970-201ENSMUST00000122289 355 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm23059-201ENSMUST00000158978 107 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm20401-201ENSMUST00000173717 212 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm20480-201ENSMUST00000173953 250 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm16456-201ENSMUST00000174431 920 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm27960-201ENSMUST00000183445 184 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm27755-201ENSMUST00000184623 132 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm18444-201ENSMUST00000191239 629 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Gm19066-201ENSMUST00000193232 1078 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Shmt1P50431 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm18591-201ENSMUST00000220568 763 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms