Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Rfx1P48377 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfx1P48377 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Rfx1P48377 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.65□□□□□ -1.18
Rfx1P48377 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Rfx1P48377 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm12874-201ENSMUST00000117190 913 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm12040-201ENSMUST00000118357 537 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm13489-201ENSMUST00000121234 971 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm12094-201ENSMUST00000121781 472 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm4997-201ENSMUST00000154056 360 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm16113-201ENSMUST00000159629 372 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Rfx1P48377 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28956-201ENSMUST00000189047 427 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm21715-201ENSMUST00000191056 694 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm44342-201ENSMUST00000196874 129 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm44383-201ENSMUST00000198940 129 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm4973-201ENSMUST00000206925 1334 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC7.65□□□□□ -1.18
Rfx1P48377 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 AC154841.1-201ENSMUST00000227263 1479 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Rfx1P48377 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Rfx1P48377 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Rfx1P48377 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Rfx1P48377 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Rfx1P48377 Gm24319-201ENSMUST00000083389 107 ntBASIC7.65□□□□□ -1.18
Rfx1P48377 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Rfx1P48377 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rfx1P48377 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Rfx1P48377 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
Rfx1P48377 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm14895-201ENSMUST00000121858 1361 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm25083-201ENSMUST00000102319 92 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Mir674-201ENSMUST00000102421 100 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm12468-201ENSMUST00000116189 404 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm12044-201ENSMUST00000120335 213 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Atf1-ps-201ENSMUST00000120608 810 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm12804-201ENSMUST00000121030 999 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm16330-201ENSMUST00000128324 297 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm22235-201ENSMUST00000157085 110 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm25180-201ENSMUST00000157746 115 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm5456-201ENSMUST00000170706 844 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm23639-201ENSMUST00000175078 132 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm20648-201ENSMUST00000175815 328 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm17045-201ENSMUST00000178600 844 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm21241-201ENSMUST00000179551 934 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms