Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx2P43241 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm22499-201ENSMUST00000104501 135 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm11774-201ENSMUST00000118601 293 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx2P43241 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx2P43241 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx2P43241 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx2P43241 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm37631-201ENSMUST00000192275 364 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm44673-201ENSMUST00000205692 996 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm18468-201ENSMUST00000207321 369 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm18470-201ENSMUST00000207467 420 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm18465-201ENSMUST00000207468 369 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm18464-201ENSMUST00000207803 420 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm18458-201ENSMUST00000207908 369 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm18461-201ENSMUST00000208421 420 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx2P43241 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdx2P43241 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.38□□□□□ -1.55
Cdx2P43241 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx2P43241 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx2P43241 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx2P43241 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx2P43241 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdx2P43241 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdx2P43241 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdx2P43241 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.38□□□□□ -1.55
Cdx2P43241 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cdx2P43241 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Cdx2P43241 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm7079-201ENSMUST00000119726 171 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm11825-201ENSMUST00000120710 736 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.37□□□□□ -1.55
Cdx2P43241 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm27754-201ENSMUST00000183340 126 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Mir7028-201ENSMUST00000185016 64 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Cdx2P43241 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Gm44253-201ENSMUST00000203387 628 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm7887-201ENSMUST00000056948 537 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm23514-201ENSMUST00000082827 130 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cdx2P43241 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdx2P43241 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms