Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.8□□□□□ -1.48
Hoxc11P31313 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm31211-201ENSMUST00000199170 253 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm44768-201ENSMUST00000205719 393 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm45689-201ENSMUST00000210522 133 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.8□□□□□ -1.48
Hoxc11P31313 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm2614-201ENSMUST00000223227 403 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hoxc11P31313 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm5582-201ENSMUST00000075251 522 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Hoxc11P31313 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc11P31313 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hoxc11P31313 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Hoxc11P31313 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hoxc11P31313 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.8□□□□□ -1.48
Hoxc11P31313 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Hoxc11P31313 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm12077-201ENSMUST00000117049 364 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm14098-201ENSMUST00000119295 623 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm14776-201ENSMUST00000121029 887 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm25459-201ENSMUST00000157953 114 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm24359-201ENSMUST00000158418 221 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm18199-201ENSMUST00000173820 835 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Mir7235-201ENSMUST00000183796 56 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Mir7653-201ENSMUST00000184358 61 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm19280-201ENSMUST00000190191 205 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm37375-201ENSMUST00000193859 387 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm37385-201ENSMUST00000195223 387 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm43798-201ENSMUST00000202056 394 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm44277-201ENSMUST00000205128 649 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm33178-201ENSMUST00000212090 257 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm46223-201ENSMUST00000215196 675 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 AC167202.1-201ENSMUST00000219027 331 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm18940-201ENSMUST00000222518 871 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm24041-201ENSMUST00000083115 156 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm10780-201ENSMUST00000099459 285 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Hoxc11P31313 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Hoxc11P31313 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.79□□□□□ -1.48
Hoxc11P31313 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Hoxc11P31313 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms