Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm36997-201ENSMUST00000195090 707 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm44265-201ENSMUST00000203631 465 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm18467-201ENSMUST00000208805 434 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.73□□□□□ -1.49
Lire1P11260 AC211878.6-201ENSMUST00000221896 358 ntBASIC5.73□□□□□ -1.49
Lire1P11260 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.73□□□□□ -1.49
Lire1P11260 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.73□□□□□ -1.49
Lire1P11260 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.73□□□□□ -1.49
Lire1P11260 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.73□□□□□ -1.49
Lire1P11260 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm6195-201ENSMUST00000063059 357 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Gm8526-201ENSMUST00000079153 475 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Lire1P11260 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.73□□□□□ -1.49
Lire1P11260 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Lire1P11260 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Lire1P11260 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Lire1P11260 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 Snora35-201ENSMUST00000104579 128 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.72□□□□□ -1.49
Lire1P11260 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
Lire1P11260 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Gm8988-201ENSMUST00000155015 1240 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm17121-201ENSMUST00000170414 847 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm17222-201ENSMUST00000180135 847 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm27960-201ENSMUST00000183445 184 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm27970-201ENSMUST00000184854 407 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.72□□□□□ -1.49
Lire1P11260 Gm28639-201ENSMUST00000191519 481 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lire1P11260 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm42799-201ENSMUST00000201331 328 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm44580-201ENSMUST00000206333 877 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Gm45269-201ENSMUST00000210359 282 ntBASIC5.72□□□□□ -1.49
Lire1P11260 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.72□□□□□ -1.49
Lire1P11260 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 Gm19212-201ENSMUST00000216642 862 ntBASIC5.72□□□□□ -1.49
Lire1P11260 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 Gm19186-201ENSMUST00000219922 333 ntBASIC5.72□□□□□ -1.49
Lire1P11260 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lire1P11260 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lire1P11260 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Lire1P11260 Gm10221-201ENSMUST00000088299 309 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Lire1P11260 Gm10794-201ENSMUST00000099624 207 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.72□□□□□ -1.49
Lire1P11260 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Lire1P11260 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Lire1P11260 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Lire1P11260 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
Lire1P11260 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Lire1P11260 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Lire1P11260 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm25795-201ENSMUST00000104421 132 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms