Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Chmp6P0C0A3 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm15078-201ENSMUST00000118371 782 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm15400-201ENSMUST00000118944 601 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm15741-201ENSMUST00000119401 754 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm24065-201ENSMUST00000157487 264 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm22160-201ENSMUST00000158405 328 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm23207-201ENSMUST00000158665 102 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm27024-201ENSMUST00000182561 755 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm27960-201ENSMUST00000183445 184 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm27887-201ENSMUST00000184367 102 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm36939-201ENSMUST00000194889 439 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm43148-201ENSMUST00000198237 520 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm7733-201ENSMUST00000199038 919 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm44582-201ENSMUST00000209125 445 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 AW046200-203ENSMUST00000211787 2479 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.03□□□□□ -1.44
Chmp6P0C0A3 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Chmp6P0C0A3 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm11447-201ENSMUST00000118983 858 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm14335-201ENSMUST00000119165 810 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm12768-201ENSMUST00000120055 759 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm15044-201ENSMUST00000120703 598 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm25489-201ENSMUST00000158727 141 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Mir3572-201ENSMUST00000175549 86 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm8581-201ENSMUST00000188636 890 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm38015-201ENSMUST00000193048 188 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm6104-201ENSMUST00000078030 603 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm17165-201ENSMUST00000096155 493 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms