Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm22584-201ENSMUST00000177935 92 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm9114-201ENSMUST00000188558 997 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm37658-201ENSMUST00000192672 315 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm42424-201ENSMUST00000198319 376 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm44134-202ENSMUST00000204777 545 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm5119-201ENSMUST00000215858 634 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 AC165154.2-201ENSMUST00000227310 336 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Dgkh-204ENSMUST00000227767 3319 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hoxd3P09027 AC164883.2-201ENSMUST00000227931 3815 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm8107-201ENSMUST00000117477 2009 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm37109-201ENSMUST00000195475 2254 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm42576-201ENSMUST00000202336 2846 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm37326-201ENSMUST00000192828 3071 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm16106-201ENSMUST00000119187 294 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm15364-201ENSMUST00000119618 585 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm11227-201ENSMUST00000119774 471 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm4852-201ENSMUST00000121202 729 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm14804-201ENSMUST00000122322 508 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm16276-201ENSMUST00000131218 262 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm22383-201ENSMUST00000158188 327 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm22206-201ENSMUST00000158612 116 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm6921-201ENSMUST00000161478 435 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm7502-201ENSMUST00000169235 733 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm3084-201ENSMUST00000169967 598 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm17973-201ENSMUST00000174509 520 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC5.87□□□□□ -1.47
Hoxd3P09027 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm29134-201ENSMUST00000186579 126 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms