Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.75□□□□□ -1.49
Scn1aA2APX8 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn1aA2APX8 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.75□□□□□ -1.49
Scn1aA2APX8 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn1aA2APX8 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn1aA2APX8 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Scn1aA2APX8 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.75□□□□□ -1.49
Scn1aA2APX8 Gm37421-201ENSMUST00000193088 132 ntBASIC5.75□□□□□ -1.49
Scn1aA2APX8 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
Scn1aA2APX8 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Scn1aA2APX8 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Scn1aA2APX8 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Scn1aA2APX8 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.75□□□□□ -1.49
Scn1aA2APX8 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm7316-201ENSMUST00000165395 445 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Mir188-201ENSMUST00000083464 68 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm45516-201ENSMUST00000211588 4182 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm11677-201ENSMUST00000121349 977 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm8321-201ENSMUST00000181691 980 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Mir6539-201ENSMUST00000183732 110 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm18468-201ENSMUST00000207321 369 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm18470-201ENSMUST00000207467 420 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm18465-201ENSMUST00000207468 369 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm18464-201ENSMUST00000207803 420 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm18458-201ENSMUST00000207908 369 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm18461-201ENSMUST00000208421 420 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Gm7688-201ENSMUST00000212857 337 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Scn1aA2APX8 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.74□□□□□ -1.49
Scn1aA2APX8 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm21051-201ENSMUST00000221757 1688 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm25758-201ENSMUST00000103987 129 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm14769-201ENSMUST00000118590 432 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm25865-201ENSMUST00000158247 104 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm29284-201ENSMUST00000188363 255 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Mir6994-201ENSMUST00000198985 73 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm45660-201ENSMUST00000210267 151 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Gm20368-201ENSMUST00000220716 301 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.73□□□□□ -1.49
Scn1aA2APX8 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms