Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm44219-201ENSMUST00000203005 273 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm5582-201ENSMUST00000075251 522 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm23737-201ENSMUST00000082547 159 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm23686-201ENSMUST00000083241 164 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm11970-201ENSMUST00000116105 320 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm26106-201ENSMUST00000157254 228 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm22210-201ENSMUST00000158101 144 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm24303-201ENSMUST00000178237 126 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm24957-201ENSMUST00000179604 132 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm18952-201ENSMUST00000194471 846 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm29745-201ENSMUST00000198005 687 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm8137-201ENSMUST00000218997 463 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Snora44-201ENSMUST00000082670 129 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Mir298-201ENSMUST00000083476 82 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm24029-201ENSMUST00000083928 143 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim3Q9R1R2 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms