Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm22990-201ENSMUST00000175427 89 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm15257-201ENSMUST00000177680 883 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm9285-201ENSMUST00000177691 697 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm15252-201ENSMUST00000177750 883 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm23269-201ENSMUST00000178701 107 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm15260-201ENSMUST00000179402 883 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm28846-201ENSMUST00000189161 368 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm7499-201ENSMUST00000210423 813 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 AC141642.1-201ENSMUST00000220598 229 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm18113-201ENSMUST00000220630 303 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 AC156016.5-201ENSMUST00000228742 355 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm5436-201ENSMUST00000058103 643 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm22444-201ENSMUST00000093693 108 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Grik1-209ENSMUST00000227986 2942 ntBASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ube3bQ9ES34 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm13439-201ENSMUST00000117541 409 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm14863-201ENSMUST00000119648 307 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm14613-201ENSMUST00000122239 752 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Cfap61-214ENSMUST00000167179 183 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm22242-201ENSMUST00000175224 118 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm18448-201ENSMUST00000186286 599 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm44990-201ENSMUST00000203922 217 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm45192-201ENSMUST00000206749 283 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm2767-201ENSMUST00000209582 473 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm7692-201ENSMUST00000213534 409 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Zfp429-203ENSMUST00000224684 524 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 AC122858.1-201ENSMUST00000226212 433 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Gm7731-201ENSMUST00000091759 470 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 AC160115.1-201ENSMUST00000224678 1574 ntBASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8.18□□□□□ -1.1
Ube3bQ9ES34 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ube3bQ9ES34 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ube3bQ9ES34 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ube3bQ9ES34 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ube3bQ9ES34 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Ube3bQ9ES34 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms