Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm13363-201ENSMUST00000122008 522 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm6872-201ENSMUST00000165001 700 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm26607-201ENSMUST00000180661 867 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm27855-201ENSMUST00000184122 128 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.83□□□□□ -1.48
Rpa3Q9CQ71 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm11447-201ENSMUST00000118983 858 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm14472-201ENSMUST00000119815 282 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm14732-201ENSMUST00000121372 545 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm25489-201ENSMUST00000158727 141 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm23774-201ENSMUST00000158990 131 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Scarna10-201ENSMUST00000158992 325 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm27148-201ENSMUST00000185086 160 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm29474-201ENSMUST00000187688 379 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm18553-201ENSMUST00000194152 634 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm43078-201ENSMUST00000197222 168 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm18537-201ENSMUST00000205709 989 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Rpa3Q9CQ71 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm12303-201ENSMUST00000119506 673 ntBASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm23806-201ENSMUST00000175157 109 ntBASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 Gm1972-201ENSMUST00000181606 964 ntBASIC5.81□□□□□ -1.48
Rpa3Q9CQ71 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms