Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm38177-201ENSMUST00000192213 1040 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm42886-201ENSMUST00000199214 466 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm44892-201ENSMUST00000208595 488 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Use1Q9CQ56 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.28□□□□□ -1.56
Use1Q9CQ56 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Use1Q9CQ56 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm6427-201ENSMUST00000118721 979 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm12618-201ENSMUST00000121754 483 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm24692-201ENSMUST00000157761 146 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm7745-201ENSMUST00000182235 973 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm28186-201ENSMUST00000187447 679 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm44374-201ENSMUST00000199821 140 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm4012-201ENSMUST00000221504 581 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm7887-201ENSMUST00000056948 537 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.27□□□□□ -1.57
Use1Q9CQ56 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Use1Q9CQ56 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm20486-201ENSMUST00000101544 128 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms