Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc28aQ8CEI3 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc28aQ8CEI3 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Ccdc28aQ8CEI3 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.71□□□□□ -1.49
Ccdc28aQ8CEI3 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm25917-201ENSMUST00000104267 130 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm11908-201ENSMUST00000117755 347 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm13835-201ENSMUST00000118459 685 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14985-201ENSMUST00000118693 786 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14874-201ENSMUST00000118995 438 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14580-201ENSMUST00000119122 718 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15754-201ENSMUST00000119191 478 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15781-201ENSMUST00000120216 323 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14531-201ENSMUST00000120845 285 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm3170-201ENSMUST00000168753 850 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm3348-201ENSMUST00000177813 850 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm21909-201ENSMUST00000178260 439 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm5946-201ENSMUST00000182340 970 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm18467-201ENSMUST00000208805 434 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm45246-201ENSMUST00000210820 367 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.71□□□□□ -1.5
Ccdc28aQ8CEI3 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm18343-201ENSMUST00000172802 604 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm20620-201ENSMUST00000177528 168 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm27820-201ENSMUST00000183628 175 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm27679-201ENSMUST00000184612 84 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm18177-201ENSMUST00000188373 404 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37430-201ENSMUST00000193039 196 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm2602-201ENSMUST00000202112 571 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44768-201ENSMUST00000205719 393 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm30646-201ENSMUST00000207662 180 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm6362-201ENSMUST00000217686 836 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ccdc28aQ8CEI3 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms