Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm17223-201ENSMUST00000171413 481 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Mir3080-201ENSMUST00000175010 79 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm29454-201ENSMUST00000190805 393 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Gm37215-201ENSMUST00000194927 1259 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 AC154452.1-201ENSMUST00000225819 241 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 AC154806.3-201ENSMUST00000227376 439 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Mir188-201ENSMUST00000083464 68 ntBASIC7.82□□□□□ -1.16
Usp47Q8BY87 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Usp47Q8BY87 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm42508-201ENSMUST00000199972 3292 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm14512-201ENSMUST00000117924 230 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm14601-201ENSMUST00000120892 236 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm15790-201ENSMUST00000161109 1251 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm7609-204ENSMUST00000161424 461 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm8256-201ENSMUST00000169178 453 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm8321-201ENSMUST00000181691 980 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm42437-201ENSMUST00000197263 923 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm18325-201ENSMUST00000203228 835 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 CT025665.1-201ENSMUST00000215251 1199 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 AC123067.1-201ENSMUST00000217711 462 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 AC238676.3-201ENSMUST00000223042 154 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Thoc7-209ENSMUST00000225325 765 ntBASIC7.81□□□□□ -1.16
Usp47Q8BY87 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Usp47Q8BY87 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm16205-201ENSMUST00000117720 1027 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm11447-201ENSMUST00000118983 858 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm11369-201ENSMUST00000120812 318 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm25176-201ENSMUST00000122640 125 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm18728-201ENSMUST00000186155 753 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm18717-201ENSMUST00000192744 1241 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm4587-201ENSMUST00000209135 637 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 AC153548.2-201ENSMUST00000219770 885 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Mir133b-201ENSMUST00000083546 119 ntBASIC7.8□□□□□ -1.16
Usp47Q8BY87 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Usp47Q8BY87 Gm43027-201ENSMUST00000202906 3691 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm42661-201ENSMUST00000202364 1442 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm42561-201ENSMUST00000202563 1442 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm14769-201ENSMUST00000118590 432 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm11894-201ENSMUST00000121579 328 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm25603-201ENSMUST00000158361 105 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms