Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm28356-202ENSMUST00000187566 858 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm19066-201ENSMUST00000193232 1078 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm37987-201ENSMUST00000194999 825 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm42509-201ENSMUST00000197390 781 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm6070-201ENSMUST00000207275 419 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 AC153800.1-201ENSMUST00000219212 365 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 AC121804.1-201ENSMUST00000221016 394 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm37092-201ENSMUST00000193381 1518 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Usp40Q8BWR4 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Usp40Q8BWR4 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm37482-201ENSMUST00000194899 2791 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm37967-201ENSMUST00000195634 2665 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm25919-201ENSMUST00000104271 132 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm13469-201ENSMUST00000118231 350 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Mup-ps19-201ENSMUST00000120390 519 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm15795-201ENSMUST00000160969 553 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm18969-201ENSMUST00000189423 730 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm37681-201ENSMUST00000193880 727 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 AC164164.2-201ENSMUST00000221809 785 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 AC144733.1-201ENSMUST00000222893 1289 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 AC167977.2-201ENSMUST00000225676 682 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 AC152394.2-202ENSMUST00000228503 1064 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 n-R5s46-201ENSMUST00000083960 116 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm23795-201ENSMUST00000084006 137 ntBASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp40Q8BWR4 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm12825-201ENSMUST00000120249 563 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm25047-201ENSMUST00000122667 104 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm24236-201ENSMUST00000157794 134 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm25227-201ENSMUST00000158204 112 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm28507-201ENSMUST00000189737 703 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm18984-201ENSMUST00000193998 1124 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm43148-201ENSMUST00000198237 520 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm17820-201ENSMUST00000220213 1068 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 AC161884.2-201ENSMUST00000224513 227 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 AC132833.3-201ENSMUST00000227472 866 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms