Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.78□□□□□ -1.32
Ddx55Q6ZPL9 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ddx55Q6ZPL9 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm9427-201ENSMUST00000116187 651 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Mir1903-201ENSMUST00000122574 80 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm3757-201ENSMUST00000125878 675 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm13147-202ENSMUST00000177526 1173 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Olfr1055-202ENSMUST00000188023 939 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm29650-201ENSMUST00000188485 742 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm28925-201ENSMUST00000188586 168 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm37599-201ENSMUST00000193067 489 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm42437-201ENSMUST00000197263 923 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm43712-201ENSMUST00000198020 291 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm44132-201ENSMUST00000205142 151 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm18587-201ENSMUST00000213736 841 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.77□□□□□ -1.33
Ddx55Q6ZPL9 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm25758-201ENSMUST00000103987 129 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm25564-201ENSMUST00000104604 132 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm24940-201ENSMUST00000158326 108 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm25971-201ENSMUST00000158953 286 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm20561-201ENSMUST00000188131 292 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm37002-201ENSMUST00000194560 373 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm37341-201ENSMUST00000194680 371 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm44330-201ENSMUST00000200106 143 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 BC023105-201ENSMUST00000073997 1227 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms