Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm12901-201ENSMUST00000118690 532 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm2199-201ENSMUST00000119065 874 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Mup-ps17-201ENSMUST00000120723 218 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm15899-201ENSMUST00000128586 238 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm25906-201ENSMUST00000158489 126 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm24176-201ENSMUST00000158928 121 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm17777-201ENSMUST00000189740 1276 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm43089-201ENSMUST00000199162 275 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm44274-201ENSMUST00000203417 256 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 AC127242.4-201ENSMUST00000221242 470 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm46379-201ENSMUST00000222551 265 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 CT009711.4-201ENSMUST00000225685 198 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 AC146601.1-201ENSMUST00000227910 905 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 AC138765.3-201ENSMUST00000227981 423 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm22364-201ENSMUST00000083097 98 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm44101-201ENSMUST00000203951 2221 ntBASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim41Q5NCC3 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trim41Q5NCC3 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim41Q5NCC3 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gm26346-201ENSMUST00000157525 329 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gm5345-201ENSMUST00000183076 1014 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Mir6906-201ENSMUST00000198998 58 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gm43406-201ENSMUST00000200356 334 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gm45226-201ENSMUST00000206602 288 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 CT030704.1-201ENSMUST00000227521 699 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Mir298-201ENSMUST00000083476 82 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Mir181a-1-201ENSMUST00000083631 87 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gm23345-201ENSMUST00000083817 150 ntBASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim41Q5NCC3 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm13627-201ENSMUST00000119700 706 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm14349-201ENSMUST00000137155 902 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm22990-201ENSMUST00000175427 89 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm6693-201ENSMUST00000189583 813 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm43276-201ENSMUST00000199712 364 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 AC131745.1-201ENSMUST00000223660 330 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Gm5436-201ENSMUST00000058103 643 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 AW822073-201ENSMUST00000075305 555 ntBASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim41Q5NCC3 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms