Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Shank3Q4ACU6 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Shank3Q4ACU6 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.9□□□□□ -1.3
Shank3Q4ACU6 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.9□□□□□ -1.3
Shank3Q4ACU6 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.9□□□□□ -1.3
Shank3Q4ACU6 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Shank3Q4ACU6 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Shank3Q4ACU6 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Gm25179-201ENSMUST00000122632 128 ntBASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Gm25292-201ENSMUST00000122797 322 ntBASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Gm37908-201ENSMUST00000195828 470 ntBASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.9□□□□□ -1.31
Shank3Q4ACU6 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Gm22826-201ENSMUST00000083774 165 ntBASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Gm22350-201ENSMUST00000083924 156 ntBASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
Shank3Q4ACU6 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm37593-201ENSMUST00000191669 3254 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm25418-201ENSMUST00000104214 129 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm4852-201ENSMUST00000121202 729 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Mir6410-201ENSMUST00000184204 104 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm42542-201ENSMUST00000197978 268 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm43441-201ENSMUST00000201458 205 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.89□□□□□ -1.31
Shank3Q4ACU6 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm37057-201ENSMUST00000192624 1916 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm11910-201ENSMUST00000121624 432 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm23508-201ENSMUST00000083079 72 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm25139-201ENSMUST00000083247 210 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Shank3Q4ACU6 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm11227-201ENSMUST00000119774 471 ntBASIC6.87□□□□□ -1.31
Shank3Q4ACU6 Gm12654-201ENSMUST00000120387 587 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms