Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm14874-201ENSMUST00000118995 438 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 Gm24730-201ENSMUST00000158228 117 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 Gm23069-201ENSMUST00000158240 311 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 Gm23164-201ENSMUST00000175084 111 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Gm37167-201ENSMUST00000194946 396 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC3.69□□□□□ -1.82
PrkdcP97313 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PrkdcP97313 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Gm44723-201ENSMUST00000207369 4000 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PrkdcP97313 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PrkdcP97313 AC156645.1-201ENSMUST00000223066 5194 ntBASIC3.69□□□□□ -1.82
PrkdcP97313 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC3.68□□□□□ -1.82
PrkdcP97313 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm12115-201ENSMUST00000119969 447 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm13932-201ENSMUST00000120873 610 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm11925-201ENSMUST00000121375 535 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm14564-201ENSMUST00000122159 294 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm26005-201ENSMUST00000158802 134 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PrkdcP97313 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PrkdcP97313 Mir6416-201ENSMUST00000183664 117 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm36378-201ENSMUST00000201709 388 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Olfr151-202ENSMUST00000221099 929 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PrkdcP97313 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm20300-201ENSMUST00000214634 3440 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm37926-201ENSMUST00000191922 2424 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
PrkdcP97313 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm11227-201ENSMUST00000119774 471 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm14515-201ENSMUST00000121327 216 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm15840-201ENSMUST00000122099 943 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm43405-201ENSMUST00000198642 337 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm45539-201ENSMUST00000210313 428 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm25139-201ENSMUST00000083247 210 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PrkdcP97313 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm44697-201ENSMUST00000207756 1679 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm38263-201ENSMUST00000195879 3059 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm44584-201ENSMUST00000208395 2880 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm37356-201ENSMUST00000193362 1613 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm22342-201ENSMUST00000122647 298 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm17043-201ENSMUST00000164621 1283 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm9006-201ENSMUST00000165520 841 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Gm43843-201ENSMUST00000202396 1587 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 AC154198.1-201ENSMUST00000222839 424 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 AC134860.4-201ENSMUST00000223592 978 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm43333-201ENSMUST00000198340 2262 ntBASIC3.68□□□□□ -1.82
PrkdcP97313 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PrkdcP97313 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PrkdcP97313 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms