Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm11833-201ENSMUST00000118393 853 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm11852-201ENSMUST00000120806 222 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm13531-201ENSMUST00000121893 543 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Shmt1P50431 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.36□□□□□ -1.39
Shmt1P50431 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm24854-201ENSMUST00000158025 98 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.36□□□□□ -1.39
Shmt1P50431 Gm3123-201ENSMUST00000163480 480 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.36□□□□□ -1.39
Shmt1P50431 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Shmt1P50431 Gm27854-201ENSMUST00000175578 244 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm27864-201ENSMUST00000183704 190 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm27219-201ENSMUST00000184633 742 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm28973-201ENSMUST00000189310 613 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm37000-201ENSMUST00000193058 428 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.36□□□□□ -1.39
Shmt1P50431 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Shmt1P50431 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm18689-201ENSMUST00000203969 902 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.36□□□□□ -1.39
Shmt1P50431 Gm19174-201ENSMUST00000216944 956 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.36□□□□□ -1.39
Shmt1P50431 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Shmt1P50431 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Shmt1P50431 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Shmt1P50431 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Shmt1P50431 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Shmt1P50431 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Shmt1P50431 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Shmt1P50431 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.36□□□□□ -1.39
Shmt1P50431 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Shmt1P50431 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.36□□□□□ -1.39
Shmt1P50431 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Shmt1P50431 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Shmt1P50431 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Shmt1P50431 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm20486-201ENSMUST00000101544 128 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm25345-201ENSMUST00000104505 133 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm15959-201ENSMUST00000121724 368 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.35□□□□□ -1.39
Shmt1P50431 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC6.35□□□□□ -1.39
Shmt1P50431 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm24065-201ENSMUST00000157487 264 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm23539-201ENSMUST00000157537 224 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm26355-201ENSMUST00000158220 105 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm24741-201ENSMUST00000158857 106 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm16558-201ENSMUST00000163015 532 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm18415-201ENSMUST00000177464 647 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm20819-201ENSMUST00000191091 925 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm42581-201ENSMUST00000201774 966 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm43105-201ENSMUST00000202987 459 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm44253-201ENSMUST00000203387 628 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm4548-201ENSMUST00000208487 509 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm45382-201ENSMUST00000210607 151 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 AC124569.4-201ENSMUST00000223830 1220 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 AC154738.1-201ENSMUST00000227054 368 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Shmt1P50431 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
Shmt1P50431 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm10704-201ENSMUST00000098952 730 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.35□□□□□ -1.39
Shmt1P50431 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Shmt1P50431 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.35□□□□□ -1.39
Shmt1P50431 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms