Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm44440-201ENSMUST00000203139 2373 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm24284-201ENSMUST00000104240 142 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm22019-201ENSMUST00000104359 96 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm23834-201ENSMUST00000104436 129 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm12654-201ENSMUST00000120387 587 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm13877-201ENSMUST00000120614 417 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm11689-201ENSMUST00000120766 302 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm15488-201ENSMUST00000121682 670 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm23071-201ENSMUST00000158242 115 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm7152-201ENSMUST00000163570 605 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm9529-201ENSMUST00000177598 579 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm24300-201ENSMUST00000177809 109 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm24017-201ENSMUST00000178726 109 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm23952-201ENSMUST00000179380 109 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28006-201ENSMUST00000183841 122 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm27596-201ENSMUST00000185061 83 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29048-201ENSMUST00000185342 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29403-201ENSMUST00000185491 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28234-201ENSMUST00000185657 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28248-201ENSMUST00000186093 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29633-202ENSMUST00000186217 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28829-201ENSMUST00000186231 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28261-201ENSMUST00000186417 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28815-201ENSMUST00000186751 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28608-201ENSMUST00000186860 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28122-201ENSMUST00000187088 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28420-201ENSMUST00000187340 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28106-201ENSMUST00000187640 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28698-201ENSMUST00000187734 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29224-201ENSMUST00000187965 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29189-201ENSMUST00000188018 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29476-201ENSMUST00000188397 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29505-201ENSMUST00000188424 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28125-201ENSMUST00000188470 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29391-201ENSMUST00000188545 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29280-201ENSMUST00000188571 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28349-201ENSMUST00000188590 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29652-201ENSMUST00000188622 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28997-201ENSMUST00000188759 429 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28819-206ENSMUST00000188816 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29079-201ENSMUST00000188875 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28213-201ENSMUST00000189183 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29382-201ENSMUST00000189549 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29377-205ENSMUST00000189603 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28327-201ENSMUST00000189638 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28790-201ENSMUST00000189642 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28907-201ENSMUST00000189700 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29586-207ENSMUST00000189745 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29115-201ENSMUST00000189870 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28366-201ENSMUST00000190147 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29212-201ENSMUST00000190384 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29533-201ENSMUST00000190403 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28162-201ENSMUST00000190545 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29030-201ENSMUST00000190848 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28742-201ENSMUST00000191001 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28899-201ENSMUST00000191161 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29567-201ENSMUST00000191188 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28222-201ENSMUST00000191210 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28776-201ENSMUST00000191282 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29306-201ENSMUST00000191366 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29618-201ENSMUST00000191423 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28136-210ENSMUST00000191432 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm29251-201ENSMUST00000191480 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm28658-201ENSMUST00000191532 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm32180-201ENSMUST00000192415 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm30598-201ENSMUST00000192620 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm37627-201ENSMUST00000194585 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm34274-201ENSMUST00000195825 615 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm4525-201ENSMUST00000198831 254 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm17992-201ENSMUST00000207346 1072 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm31663-202ENSMUST00000208481 1190 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm7639-201ENSMUST00000212608 484 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm18729-201ENSMUST00000217230 621 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 AC124729.1-202ENSMUST00000225587 938 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 AC129208.2-201ENSMUST00000228506 320 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfx1P48377 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Rfx1P48377 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.66□□□□□ -1.18
Rfx1P48377 Gm37435-201ENSMUST00000192078 3947 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.66□□□□□ -1.18
Rfx1P48377 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Rfx1P48377 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms