Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.27□□□□□ -1.57
Sox6P40645 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm15275-201ENSMUST00000154752 347 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm26106-201ENSMUST00000157254 228 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 Gm25025-201ENSMUST00000175018 111 ntBASIC5.27□□□□□ -1.57
Sox6P40645 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm6693-201ENSMUST00000189583 813 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm18444-201ENSMUST00000191239 629 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm43222-201ENSMUST00000199013 603 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm42646-201ENSMUST00000202233 914 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm44053-201ENSMUST00000203364 929 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm45870-201ENSMUST00000211269 601 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.27□□□□□ -1.57
Sox6P40645 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.27□□□□□ -1.57
Sox6P40645 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.27□□□□□ -1.57
Sox6P40645 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm8526-201ENSMUST00000079153 475 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.27□□□□□ -1.57
Sox6P40645 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Sox6P40645 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Sox6P40645 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Sox6P40645 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sox6P40645 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 Gm12131-201ENSMUST00000117479 359 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm13428-201ENSMUST00000117540 365 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm14529-201ENSMUST00000117894 406 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm13641-201ENSMUST00000117993 473 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm12494-201ENSMUST00000121684 521 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm14237-201ENSMUST00000122080 430 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm15335-201ENSMUST00000122442 411 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm25782-201ENSMUST00000122526 289 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Sox6P40645 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Gm25826-201ENSMUST00000157090 137 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm16125-201ENSMUST00000159003 339 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 Gm22932-201ENSMUST00000175510 72 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
Sox6P40645 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
Sox6P40645 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Gm18799-201ENSMUST00000189104 913 ntBASIC5.26□□□□□ -1.57
Sox6P40645 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.26□□□□□ -1.57
Sox6P40645 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm43779-201ENSMUST00000196691 829 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.26□□□□□ -1.57
Sox6P40645 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.26□□□□□ -1.57
Sox6P40645 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.26□□□□□ -1.57
Sox6P40645 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC5.26□□□□□ -1.57
Sox6P40645 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.26□□□□□ -1.57
Sox6P40645 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Gm5612-201ENSMUST00000053326 375 ntBASIC5.26□□□□□ -1.57
Sox6P40645 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Sox6P40645 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Sox6P40645 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Sox6P40645 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms