Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
BdnfP21237 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
BdnfP21237 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BdnfP21237 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BdnfP21237 Naip3-201ENSMUST00000118082 4208 ntBASIC5.83□□□□□ -1.48
BdnfP21237 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BdnfP21237 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BdnfP21237 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BdnfP21237 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BdnfP21237 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Fus-202ENSMUST00000079045 2623 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Mir147-201ENSMUST00000102354 79 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm13593-201ENSMUST00000121329 692 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm12399-201ENSMUST00000121475 446 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm12929-201ENSMUST00000122406 370 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm26487-201ENSMUST00000158022 94 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm24300-201ENSMUST00000177809 109 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm24017-201ENSMUST00000178726 109 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm23952-201ENSMUST00000179380 109 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm28191-201ENSMUST00000189112 211 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm29605-201ENSMUST00000190800 292 ntBASIC5.82□□□□□ -1.48
BdnfP21237 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Gm37883-201ENSMUST00000194970 725 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm43037-201ENSMUST00000196808 250 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm43315-201ENSMUST00000198120 313 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Gm44856-201ENSMUST00000206639 304 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Gm7128-201ENSMUST00000211639 533 ntBASIC5.82□□□□□ -1.48
BdnfP21237 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.82□□□□□ -1.48
BdnfP21237 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BdnfP21237 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.82□□□□□ -1.48
BdnfP21237 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
BdnfP21237 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.82□□□□□ -1.48
BdnfP21237 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
BdnfP21237 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BdnfP21237 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BdnfP21237 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.81□□□□□ -1.48
BdnfP21237 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BdnfP21237 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BdnfP21237 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
BdnfP21237 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BdnfP21237 Robo2-210ENSMUST00000226478 8059 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BdnfP21237 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BdnfP21237 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
BdnfP21237 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BdnfP21237 Gm11799-201ENSMUST00000116110 460 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
BdnfP21237 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BdnfP21237 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.81□□□□□ -1.48
BdnfP21237 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.81□□□□□ -1.48
BdnfP21237 Gm16297-201ENSMUST00000161466 459 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Gm8582-201ENSMUST00000164061 789 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Gm17421-201ENSMUST00000167845 674 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
BdnfP21237 Gm38181-201ENSMUST00000181357 720 ntBASIC5.81□□□□□ -1.48
BdnfP21237 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms