Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm43386-201ENSMUST00000199654 4001 ntBASIC5□□□□□ -1.61
P20040 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5□□□□□ -1.61
P20040 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.99□□□□□ -1.61
P20040 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
P20040 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
P20040 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
P20040 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
P20040 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
P20040 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
P20040 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
P20040 Gm13771-201ENSMUST00000117988 238 ntBASIC4.99□□□□□ -1.61
P20040 Gm6744-201ENSMUST00000119303 543 ntBASIC4.99□□□□□ -1.61
P20040 Gm15959-201ENSMUST00000121724 368 ntBASIC4.99□□□□□ -1.61
P20040 Gm11679-201ENSMUST00000121830 779 ntBASIC4.99□□□□□ -1.61
P20040 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
P20040 Gm9428-201ENSMUST00000127214 769 ntBASIC4.99□□□□□ -1.61
P20040 Gm16125-201ENSMUST00000159003 339 ntBASIC4.99□□□□□ -1.61
P20040 Mir5125-201ENSMUST00000175240 79 ntBASIC4.99□□□□□ -1.61
P20040 Gm18953-201ENSMUST00000175694 300 ntBASIC4.99□□□□□ -1.61
P20040 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
P20040 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC4.99□□□□□ -1.61
P20040 Gm1972-201ENSMUST00000181606 964 ntBASIC4.99□□□□□ -1.61
P20040 Gm26970-201ENSMUST00000182990 964 ntBASIC4.99□□□□□ -1.61
P20040 Mir7220-201ENSMUST00000183978 60 ntBASIC4.99□□□□□ -1.61
P20040 Mir7211-201ENSMUST00000184071 63 ntBASIC4.99□□□□□ -1.61
P20040 Gm29124-201ENSMUST00000186576 452 ntBASIC4.99□□□□□ -1.61
P20040 Gm7266-201ENSMUST00000187999 405 ntBASIC4.99□□□□□ -1.61
P20040 Gm5734-201ENSMUST00000189787 913 ntBASIC4.99□□□□□ -1.61
P20040 Gm29745-201ENSMUST00000198005 687 ntBASIC4.99□□□□□ -1.61
P20040 Gm2287-202ENSMUST00000199619 1000 ntBASIC4.99□□□□□ -1.61
P20040 Gm42961-201ENSMUST00000202023 181 ntBASIC4.99□□□□□ -1.61
P20040 AC124826.1-201ENSMUST00000221651 325 ntBASIC4.99□□□□□ -1.61
P20040 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
P20040 Gm5830-201ENSMUST00000049117 443 ntBASIC4.99□□□□□ -1.61
P20040 Mir298-201ENSMUST00000083476 82 ntBASIC4.99□□□□□ -1.61
P20040 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
P20040 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
P20040 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
P20040 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
P20040 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
P20040 CT030159.1-201ENSMUST00000221580 2261 ntBASIC4.99□□□□□ -1.61
P20040 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
P20040 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
P20040 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
P20040 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
P20040 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
P20040 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
P20040 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
P20040 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.98□□□□□ -1.61
P20040 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.98□□□□□ -1.61
P20040 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC4.98□□□□□ -1.61
P20040 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.98□□□□□ -1.61
P20040 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
P20040 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
P20040 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
P20040 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
P20040 Mir546-201ENSMUST00000102105 121 ntBASIC4.98□□□□□ -1.61
P20040 Gm22372-201ENSMUST00000104589 136 ntBASIC4.98□□□□□ -1.61
P20040 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
P20040 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
P20040 Gm12131-201ENSMUST00000117479 359 ntBASIC4.98□□□□□ -1.61
P20040 Gm12850-201ENSMUST00000119210 436 ntBASIC4.98□□□□□ -1.61
P20040 Gm12005-201ENSMUST00000121451 379 ntBASIC4.98□□□□□ -1.61
P20040 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.98□□□□□ -1.61
P20040 Gm25826-201ENSMUST00000157090 137 ntBASIC4.98□□□□□ -1.61
P20040 Gm22492-201ENSMUST00000157192 297 ntBASIC4.98□□□□□ -1.61
P20040 Gm25342-201ENSMUST00000157459 122 ntBASIC4.98□□□□□ -1.61
P20040 Gm22867-201ENSMUST00000157499 109 ntBASIC4.98□□□□□ -1.61
P20040 Gm22518-201ENSMUST00000158267 68 ntBASIC4.98□□□□□ -1.61
P20040 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
P20040 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC4.98□□□□□ -1.61
P20040 Gm23450-201ENSMUST00000178285 91 ntBASIC4.98□□□□□ -1.61
P20040 Gm6055-201ENSMUST00000180532 378 ntBASIC4.98□□□□□ -1.61
P20040 Gm4832-201ENSMUST00000182679 399 ntBASIC4.98□□□□□ -1.61
P20040 Gm28066-201ENSMUST00000188657 472 ntBASIC4.98□□□□□ -1.61
P20040 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.98□□□□□ -1.61
P20040 Gm2979-201ENSMUST00000193442 463 ntBASIC4.98□□□□□ -1.61
P20040 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.98□□□□□ -1.61
P20040 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.98□□□□□ -1.61
P20040 Gm2926-201ENSMUST00000205625 239 ntBASIC4.98□□□□□ -1.61
P20040 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC4.98□□□□□ -1.61
P20040 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.98□□□□□ -1.61
P20040 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC4.98□□□□□ -1.61
P20040 Gm4510-201ENSMUST00000218265 427 ntBASIC4.98□□□□□ -1.61
P20040 Gm6068-201ENSMUST00000222270 387 ntBASIC4.98□□□□□ -1.61
P20040 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
P20040 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
P20040 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
P20040 Mir375-201ENSMUST00000083682 64 ntBASIC4.98□□□□□ -1.61
P20040 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
P20040 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms