Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm13521-201ENSMUST00000118922 866 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm13038-201ENSMUST00000119886 459 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm16523-201ENSMUST00000121253 592 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm23214-201ENSMUST00000122716 157 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm4134-201ENSMUST00000173244 563 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm26177-201ENSMUST00000178683 107 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm8532-201ENSMUST00000179174 461 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm27542-201ENSMUST00000184184 256 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm7436-201ENSMUST00000187229 391 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm19029-201ENSMUST00000189923 564 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm20162-201ENSMUST00000193629 871 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm17781-201ENSMUST00000195232 649 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm6105-201ENSMUST00000200580 624 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm43440-201ENSMUST00000201957 729 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 CT010472.1-201ENSMUST00000224000 704 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm24042-201ENSMUST00000083114 103 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Olfr895-201ENSMUST00000093864 951 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm38339-201ENSMUST00000195479 1829 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Prkaa1-202ENSMUST00000228218 4618 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm37924-201ENSMUST00000195470 3647 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 AC168056.4-201ENSMUST00000223835 2567 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.89□□□□□ -1.47
Hoxd3P09027 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Hoxd3P09027 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hoxd3P09027 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hoxd3P09027 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm18248-201ENSMUST00000191164 1846 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hoxd3P09027 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm5228-201ENSMUST00000117186 357 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm13229-201ENSMUST00000118238 340 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm11474-201ENSMUST00000120814 277 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm2986-201ENSMUST00000121603 382 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.88□□□□□ -1.47
Hoxd3P09027 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm23332-201ENSMUST00000157424 275 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm23392-201ENSMUST00000157580 113 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hoxd3P09027 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.88□□□□□ -1.47
Hoxd3P09027 Gm20656-201ENSMUST00000176925 518 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms