Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Gm3008-201ENSMUST00000160566 571 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.85□□□□□ -1.47
Cldn5O54942 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Mir6971-201ENSMUST00000183497 63 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 Gm27158-201ENSMUST00000183813 238 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 Gm44580-201ENSMUST00000206333 877 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 Gm9685-201ENSMUST00000211275 538 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.85□□□□□ -1.47
Cldn5O54942 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cldn5O54942 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cldn5O54942 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cldn5O54942 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cldn5O54942 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Cldn5O54942 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm11561-201ENSMUST00000117429 417 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm13451-201ENSMUST00000117649 592 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm13681-201ENSMUST00000117925 210 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm11826-201ENSMUST00000118781 438 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm14620-201ENSMUST00000120656 383 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm12267-201ENSMUST00000121609 761 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm22106-201ENSMUST00000122544 127 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm23211-201ENSMUST00000122717 308 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm25291-201ENSMUST00000122795 144 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm18969-201ENSMUST00000189423 730 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.84□□□□□ -1.47
Cldn5O54942 Gm28467-201ENSMUST00000190981 318 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm18698-201ENSMUST00000192327 668 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm38040-201ENSMUST00000193505 225 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Gm29755-201ENSMUST00000196976 948 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.84□□□□□ -1.47
Cldn5O54942 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Cldn5O54942 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Cldn5O54942 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Cldn5O54942 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Cldn5O54942 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.84□□□□□ -1.48
Cldn5O54942 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.84□□□□□ -1.48
Cldn5O54942 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cldn5O54942 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
Cldn5O54942 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cldn5O54942 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cldn5O54942 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cldn5O54942 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cldn5O54942 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.83□□□□□ -1.48
Cldn5O54942 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.83□□□□□ -1.48
Cldn5O54942 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cldn5O54942 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Cldn5O54942 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.83□□□□□ -1.48
Cldn5O54942 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cldn5O54942 Gm25422-201ENSMUST00000104219 129 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms