Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Hmgb3O54879 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.46□□□□□ -1.69
Hmgb3O54879 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.69
Hmgb3O54879 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Hmgb3O54879 Gm43612-201ENSMUST00000196087 3207 ntBASIC4.46□□□□□ -1.69
Hmgb3O54879 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Hmgb3O54879 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Hmgb3O54879 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm15660-201ENSMUST00000118997 478 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm14472-201ENSMUST00000119815 282 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.46□□□□□ -1.7
Hmgb3O54879 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm10087-201ENSMUST00000167650 330 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm22690-201ENSMUST00000175054 110 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm23806-201ENSMUST00000175157 109 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm24465-201ENSMUST00000178398 107 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm28064-201ENSMUST00000185639 858 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm29496-201ENSMUST00000189854 693 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm37659-201ENSMUST00000194574 111 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm36932-201ENSMUST00000195226 929 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Mir6516-201ENSMUST00000196236 110 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm8874-201ENSMUST00000196826 286 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm42452-201ENSMUST00000199749 617 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm7492-201ENSMUST00000201745 725 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm44214-201ENSMUST00000204153 606 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm8911-201ENSMUST00000213986 652 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC4.46□□□□□ -1.7
Hmgb3O54879 AC154640.3-201ENSMUST00000227492 846 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 AC123665.3-201ENSMUST00000228735 1216 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm23737-201ENSMUST00000082547 159 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hmgb3O54879 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Hmgb3O54879 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC4.46□□□□□ -1.7
Hmgb3O54879 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Hmgb3O54879 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm37780-201ENSMUST00000194117 1873 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm44667-201ENSMUST00000207632 3337 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm42540-201ENSMUST00000200319 2008 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm11271-201ENSMUST00000116054 440 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm15765-201ENSMUST00000118407 910 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm11742-201ENSMUST00000119903 233 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm25291-201ENSMUST00000122795 144 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Hmgb3O54879 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC4.45□□□□□ -1.7
Hmgb3O54879 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm25904-201ENSMUST00000158491 143 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm25065-201ENSMUST00000177914 132 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm25891-201ENSMUST00000180050 132 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm26923-201ENSMUST00000182615 996 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Mir6987-201ENSMUST00000184789 73 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm27148-201ENSMUST00000185086 160 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm44261-201ENSMUST00000203337 209 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm19880-201ENSMUST00000207731 318 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms