Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm23485-201ENSMUST00000104181 155 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm23894-201ENSMUST00000158107 313 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm25603-201ENSMUST00000158361 105 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm21241-201ENSMUST00000179551 934 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Mir3473e-201ENSMUST00000183932 110 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm9541-201ENSMUST00000188409 502 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm20871-201ENSMUST00000191322 931 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm37358-201ENSMUST00000195492 479 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm43655-201ENSMUST00000197367 222 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm8556-201ENSMUST00000210437 664 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Gm37140-201ENSMUST00000192914 1684 ntBASIC7.72□□□□□ -1.17
NpcdF8VQB8 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NpcdF8VQB8 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
NpcdF8VQB8 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NpcdF8VQB8 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NpcdF8VQB8 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.71□□□□□ -1.17
NpcdF8VQB8 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.71□□□□□ -1.17
NpcdF8VQB8 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.71□□□□□ -1.17
NpcdF8VQB8 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.71□□□□□ -1.17
NpcdF8VQB8 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
NpcdF8VQB8 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
NpcdF8VQB8 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Defa-ps1-201ENSMUST00000119062 282 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Defa-ps6-201ENSMUST00000122172 282 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm24190-201ENSMUST00000157976 216 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm23034-201ENSMUST00000158001 147 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm23071-201ENSMUST00000158242 115 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm25013-201ENSMUST00000158402 128 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm23632-201ENSMUST00000175289 125 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm5473-201ENSMUST00000179326 642 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.71□□□□□ -1.18
NpcdF8VQB8 Gm29197-201ENSMUST00000185922 702 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms