Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm37077-201ENSMUST00000195723 3691 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm18259-201ENSMUST00000220991 2010 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm45358-201ENSMUST00000209492 2305 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm14775-201ENSMUST00000122089 310 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm25224-201ENSMUST00000158195 68 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm26170-201ENSMUST00000158419 148 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm16571-201ENSMUST00000159112 291 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Rab26os-201ENSMUST00000176215 477 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm14125-202ENSMUST00000120921 756 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm16285-201ENSMUST00000162999 347 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm17121-201ENSMUST00000170414 847 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm22367-201ENSMUST00000178930 132 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm17222-201ENSMUST00000180135 847 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Mir409-201ENSMUST00000198153 79 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm6863-201ENSMUST00000052882 636 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 AC103672.2-201ENSMUST00000228146 1687 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Col4a6B1AVK5 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm22657-201ENSMUST00000104197 132 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm24469-201ENSMUST00000104487 131 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm13737-201ENSMUST00000119793 232 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm4832-201ENSMUST00000182679 399 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col4a6B1AVK5 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC5.73□□□□□ -1.49
Col4a6B1AVK5 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms