Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm37864-201ENSMUST00000195308 3075 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm24265-201ENSMUST00000101833 141 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm15803-201ENSMUST00000120118 394 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm15152-201ENSMUST00000121540 394 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm12267-201ENSMUST00000121609 761 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm25605-201ENSMUST00000158364 124 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm22122-201ENSMUST00000175147 200 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm24407-201ENSMUST00000177864 141 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 AC154461.5-201ENSMUST00000225429 774 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm23624-201ENSMUST00000082463 321 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm37183-201ENSMUST00000191712 3405 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm21122-201ENSMUST00000191548 3452 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC4.7□□□□□ -1.66
Col6a4A2AX52 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm15812-201ENSMUST00000162331 748 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm45358-201ENSMUST00000209492 2305 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm5834-201ENSMUST00000126680 1026 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Clec2j-202ENSMUST00000203658 606 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm45215-201ENSMUST00000206407 395 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm15500-201ENSMUST00000071523 894 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm22807-201ENSMUST00000082737 129 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Col6a4A2AX52 Gm43503-201ENSMUST00000200033 3408 ntBASIC4.69□□□□□ -1.66
Col6a4A2AX52 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm14857-201ENSMUST00000117862 3185 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm34224-201ENSMUST00000204606 364 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.68□□□□□ -1.66
Col6a4A2AX52 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col6a4A2AX52 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms