Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gm7670-201ENSMUST00000121272 641 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gm12422-201ENSMUST00000121431 302 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Mir5103-201ENSMUST00000175111 79 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gm44673-201ENSMUST00000205692 996 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 AC123067.1-201ENSMUST00000217711 462 ntBASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Scn3aA2ASI5 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm24265-201ENSMUST00000101833 141 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm11912-201ENSMUST00000117235 264 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm7316-201ENSMUST00000165395 445 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm8256-201ENSMUST00000169178 453 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm22122-201ENSMUST00000175147 200 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm24407-201ENSMUST00000177864 141 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm29592-201ENSMUST00000189434 370 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm7688-201ENSMUST00000212857 337 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm23514-201ENSMUST00000082827 130 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Scn3aA2ASI5 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm9429-201ENSMUST00000117804 868 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm15766-201ENSMUST00000118025 813 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm12854-201ENSMUST00000128518 297 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm43408-201ENSMUST00000198263 440 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm45215-201ENSMUST00000206407 395 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm45008-201ENSMUST00000206420 493 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Gm7665-201ENSMUST00000076710 297 ntBASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Scn3aA2ASI5 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms