Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim3Q9R1R2 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm15331-201ENSMUST00000120225 385 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm11533-201ENSMUST00000120287 477 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm12494-201ENSMUST00000121684 521 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm15959-201ENSMUST00000121724 368 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm7152-201ENSMUST00000163570 605 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Mir5125-201ENSMUST00000175240 79 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm29201-201ENSMUST00000189120 431 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm20940-201ENSMUST00000197308 360 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm44694-201ENSMUST00000205317 1298 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm46223-201ENSMUST00000215196 675 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm4510-201ENSMUST00000218265 427 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim3Q9R1R2 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm16007-201ENSMUST00000117837 286 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm15801-201ENSMUST00000120920 522 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm8761-201ENSMUST00000121507 955 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm25826-201ENSMUST00000157090 137 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm22724-201ENSMUST00000158091 127 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm8783-201ENSMUST00000159764 522 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm15970-201ENSMUST00000160623 834 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm3076-201ENSMUST00000161613 451 ntBASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim3Q9R1R2 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms