Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm12303-201ENSMUST00000119506 673 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm12482-201ENSMUST00000120435 630 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm14679-201ENSMUST00000121536 722 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm22867-201ENSMUST00000157499 109 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm23279-201ENSMUST00000157912 97 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm24216-201ENSMUST00000158259 117 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm6808-201ENSMUST00000162341 807 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm23631-201ENSMUST00000175291 123 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm22698-201ENSMUST00000175375 108 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm37716-201ENSMUST00000193553 947 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm18427-201ENSMUST00000195422 515 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm19060-201ENSMUST00000201959 421 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm45628-201ENSMUST00000210849 274 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm6104-201ENSMUST00000078030 603 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.3□□□□□ -1.56
Cdc40Q9DC48 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm24886-201ENSMUST00000104384 123 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm11737-201ENSMUST00000118713 468 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm13245-201ENSMUST00000119646 260 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm9006-201ENSMUST00000165520 841 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm29489-201ENSMUST00000188934 324 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm43456-201ENSMUST00000202519 457 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm45008-201ENSMUST00000206420 493 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Cdc40Q9DC48 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Cdc40Q9DC48 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms