Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm21959-201ENSMUST00000178439 452 ntBASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm28467-201ENSMUST00000190981 318 ntBASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm18996-201ENSMUST00000214851 755 ntBASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm18329-201ENSMUST00000215832 589 ntBASIC6.39□□□□□ -1.39
Smc1aQ9CU62 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.39□□□□□ -1.39
Smc1aQ9CU62 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.39□□□□□ -1.39
Smc1aQ9CU62 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm12482-201ENSMUST00000120435 630 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm14732-201ENSMUST00000121372 545 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm23669-201ENSMUST00000157470 128 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm29159-201ENSMUST00000187969 379 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm43456-201ENSMUST00000202519 457 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm23502-201ENSMUST00000083902 145 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.38□□□□□ -1.39
Smc1aQ9CU62 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.37□□□□□ -1.39
Smc1aQ9CU62 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm3943-201ENSMUST00000118606 718 ntBASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm12494-201ENSMUST00000121684 521 ntBASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.37□□□□□ -1.39
Smc1aQ9CU62 Gm9671-201ENSMUST00000171502 547 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms