Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm13731-201ENSMUST00000117332 196 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm6806-201ENSMUST00000120092 1006 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm3835-201ENSMUST00000120752 403 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm15750-201ENSMUST00000120970 616 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Snora81-201ENSMUST00000157310 178 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm17061-201ENSMUST00000163167 499 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm8609-201ENSMUST00000182967 998 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm27804-201ENSMUST00000185135 119 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm28967-201ENSMUST00000187351 281 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm7867-201ENSMUST00000189856 546 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm18426-201ENSMUST00000191874 973 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm43849-201ENSMUST00000201086 215 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm7463-201ENSMUST00000201541 547 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm21112-201ENSMUST00000212224 578 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm7760-201ENSMUST00000212265 578 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm7807-201ENSMUST00000212475 578 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm9267-201ENSMUST00000222831 404 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 AC166830.1-201ENSMUST00000224201 533 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Mir7b-201ENSMUST00000083557 111 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Gm22444-201ENSMUST00000093693 108 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.13□□□□□ -1.43
Trim8Q99PJ2 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim8Q99PJ2 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm12392-201ENSMUST00000118014 938 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm11501-201ENSMUST00000118039 581 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm13455-201ENSMUST00000118767 517 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm8855-201ENSMUST00000118888 878 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm6987-201ENSMUST00000119319 428 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm16363-201ENSMUST00000132460 877 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Samd15-201ENSMUST00000169669 1194 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm19807-201ENSMUST00000173971 667 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm22990-201ENSMUST00000175427 89 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm26914-201ENSMUST00000182262 223 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm38214-201ENSMUST00000192581 988 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm37993-201ENSMUST00000195301 988 ntBASIC6.12□□□□□ -1.43
Trim8Q99PJ2 Gm17967-201ENSMUST00000195319 647 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms