Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm14563-201ENSMUST00000120571 354 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm18150-201ENSMUST00000195341 645 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 BX530055.1-201ENSMUST00000197285 122 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm18618-201ENSMUST00000222211 473 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm22899-201ENSMUST00000104540 131 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm16149-201ENSMUST00000117631 309 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm16571-201ENSMUST00000159112 291 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm6051-201ENSMUST00000201529 352 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm8942-201ENSMUST00000217892 400 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm46327-201ENSMUST00000218240 365 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.57□□□□□ -1.36
StrcQ8VIM6 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
StrcQ8VIM6 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
StrcQ8VIM6 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm24117-201ENSMUST00000103973 133 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm12073-201ENSMUST00000117382 524 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm12110-201ENSMUST00000121601 579 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm25942-201ENSMUST00000180080 110 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.56□□□□□ -1.36
StrcQ8VIM6 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.56□□□□□ -1.36
StrcQ8VIM6 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
StrcQ8VIM6 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
StrcQ8VIM6 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm22020-201ENSMUST00000104358 136 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm16082-201ENSMUST00000115992 377 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm26153-201ENSMUST00000157433 127 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm23993-201ENSMUST00000157478 144 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm6047-201ENSMUST00000167221 574 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm4832-201ENSMUST00000182679 399 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm6717-201ENSMUST00000185549 838 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.55□□□□□ -1.36
StrcQ8VIM6 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
StrcQ8VIM6 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms