Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm12110-201ENSMUST00000121601 579 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm4660-201ENSMUST00000131499 403 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm27754-201ENSMUST00000183340 126 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm37203-201ENSMUST00000191618 385 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm37444-201ENSMUST00000193605 439 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm37308-201ENSMUST00000194684 100 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Mir219c-201ENSMUST00000199860 60 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm4374-201ENSMUST00000204929 424 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm17988-201ENSMUST00000208796 535 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm8137-201ENSMUST00000218997 463 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trub1Q8C0D0 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm11737-201ENSMUST00000118713 468 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm16200-201ENSMUST00000120385 331 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm23224-201ENSMUST00000158122 271 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm16557-201ENSMUST00000159182 191 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm27030-201ENSMUST00000182551 464 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm8920-201ENSMUST00000196153 924 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Clec2j-202ENSMUST00000203658 606 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm19921-201ENSMUST00000210505 703 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm18996-201ENSMUST00000214851 755 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm25133-201ENSMUST00000082647 130 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Snora30-201ENSMUST00000083325 130 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trub1Q8C0D0 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trub1Q8C0D0 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms