Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm15057-201ENSMUST00000121516 534 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm12650-201ENSMUST00000121966 258 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm24216-201ENSMUST00000158259 117 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm27715-201ENSMUST00000184714 260 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Olfr1055-202ENSMUST00000188023 939 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm38015-201ENSMUST00000193048 188 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm44395-201ENSMUST00000197056 153 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm43036-201ENSMUST00000200594 373 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm7587-201ENSMUST00000207618 1021 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm18591-201ENSMUST00000220568 763 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 AC108945.1-201ENSMUST00000226477 94 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm24525-201ENSMUST00000082917 151 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Usp40Q8BWR4 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.05□□□□□ -1.12
Usp40Q8BWR4 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm3608-201ENSMUST00000086725 2858 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm11908-201ENSMUST00000117755 347 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm11984-201ENSMUST00000118142 766 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm12303-201ENSMUST00000119506 673 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm7309-201ENSMUST00000121670 581 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm24692-201ENSMUST00000157761 146 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm26172-201ENSMUST00000158421 134 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Ear-ps5-201ENSMUST00000164700 463 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm29161-201ENSMUST00000188250 699 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm18427-201ENSMUST00000195422 515 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm45185-201ENSMUST00000207556 404 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm24919-201ENSMUST00000083020 106 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Mir218-2-201ENSMUST00000083649 110 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm36947-201ENSMUST00000194709 2249 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.04□□□□□ -1.12
Usp40Q8BWR4 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.04□□□□□ -1.12
Usp40Q8BWR4 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm14103-201ENSMUST00000119075 366 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm6620-201ENSMUST00000120113 715 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm17043-201ENSMUST00000164621 1283 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Usp40Q8BWR4 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms