Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm24789-201ENSMUST00000104282 131 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm14512-201ENSMUST00000117924 230 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm12040-201ENSMUST00000118357 537 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm22959-201ENSMUST00000122514 303 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm22106-201ENSMUST00000122544 127 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm37024-201ENSMUST00000192224 868 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm22897-202ENSMUST00000197782 127 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm44316-201ENSMUST00000199274 97 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm44330-201ENSMUST00000200106 143 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm43794-201ENSMUST00000200971 692 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm44243-201ENSMUST00000204323 692 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm8288-201ENSMUST00000223406 593 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.1□□□□□ -1.43
Trim17Q7TPM3 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim17Q7TPM3 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.09□□□□□ -1.43
Trim17Q7TPM3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim17Q7TPM3 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms