Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC102582.1-201ENSMUST00000215376 378 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC125020.2-201ENSMUST00000218894 348 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Gm8275-201ENSMUST00000219732 424 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC157017.1-201ENSMUST00000220148 364 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC118639.1-204ENSMUST00000226401 694 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC112142.1-206ENSMUST00000228136 982 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Gm24621-201ENSMUST00000082679 140 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Gm26063-201ENSMUST00000083378 107 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Mir16-2-201ENSMUST00000083672 95 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Gm5446-201ENSMUST00000091762 784 ntBASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Scaf4Q6PFF0 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 AC190403.1-201ENSMUST00000224515 1325 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm15854-201ENSMUST00000118879 808 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm14788-201ENSMUST00000119457 375 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm14903-201ENSMUST00000122435 537 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm24065-201ENSMUST00000157487 264 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm26182-201ENSMUST00000157688 116 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm23639-201ENSMUST00000175078 132 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm5283-201ENSMUST00000177874 334 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm27317-201ENSMUST00000183533 95 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm28580-201ENSMUST00000186767 88 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm29545-201ENSMUST00000188878 694 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm18849-201ENSMUST00000189861 560 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm29141-201ENSMUST00000190357 882 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm28620-201ENSMUST00000190463 439 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm29138-201ENSMUST00000191444 348 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm18296-201ENSMUST00000192475 783 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm37550-201ENSMUST00000193230 463 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm29950-201ENSMUST00000195273 237 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm4525-201ENSMUST00000198831 254 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm4874-201ENSMUST00000203589 691 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm44277-201ENSMUST00000205128 649 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm18855-201ENSMUST00000206689 570 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm45246-201ENSMUST00000210820 367 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm4042-201ENSMUST00000216946 637 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm6885-201ENSMUST00000217261 372 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 AC166323.1-201ENSMUST00000217756 367 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Scaf4Q6PFF0 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms