Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 AC138329.1-201ENSMUST00000225040 471 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 CT025603.4-201ENSMUST00000225777 413 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Xpo7-203ENSMUST00000226448 3663 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Rfx1P48377 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.68□□□□□ -1.18
Rfx1P48377 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Rfx1P48377 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Rfx1P48377 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC7.68□□□□□ -1.18
Rfx1P48377 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Rfx1P48377 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm12306-201ENSMUST00000117256 171 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm13983-201ENSMUST00000118018 865 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm12230-201ENSMUST00000118301 454 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm13463-201ENSMUST00000119020 233 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm9785-202ENSMUST00000144563 593 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.67□□□□□ -1.18
Rfx1P48377 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Rfx1P48377 Mir7685-201ENSMUST00000183555 62 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm3121-201ENSMUST00000187086 406 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm37946-201ENSMUST00000192064 347 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm38122-201ENSMUST00000192679 885 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm37511-201ENSMUST00000192901 294 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm43089-201ENSMUST00000199162 275 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm8275-201ENSMUST00000219732 424 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Rfx1P48377 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Rfx1P48377 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Rfx1P48377 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Rfx1P48377 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
Rfx1P48377 AC120153.1-201ENSMUST00000226502 1311 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Gm13230-201ENSMUST00000120870 1575 ntBASIC7.67□□□□□ -1.18
Rfx1P48377 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Rfx1P48377 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC7.66□□□□□ -1.18
Rfx1P48377 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Rfx1P48377 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms