Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.67□□□□□ -1.5
HttP42859 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.67□□□□□ -1.5
HttP42859 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HttP42859 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.67□□□□□ -1.5
HttP42859 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HttP42859 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
HttP42859 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.66□□□□□ -1.5
HttP42859 Gm24982-201ENSMUST00000104456 132 ntBASIC5.66□□□□□ -1.5
HttP42859 Gm12583-201ENSMUST00000120677 853 ntBASIC5.66□□□□□ -1.5
HttP42859 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.66□□□□□ -1.5
HttP42859 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Mir7062-201ENSMUST00000185038 66 ntBASIC5.66□□□□□ -1.5
HttP42859 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Gm6988-201ENSMUST00000222676 375 ntBASIC5.66□□□□□ -1.5
HttP42859 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.66□□□□□ -1.5
HttP42859 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.66□□□□□ -1.5
HttP42859 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Mir678-201ENSMUST00000102114 84 ntBASIC5.66□□□□□ -1.5
HttP42859 Gm14107-201ENSMUST00000117774 330 ntBASIC5.66□□□□□ -1.5
HttP42859 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HttP42859 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.66□□□□□ -1.5
HttP42859 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.66□□□□□ -1.5
HttP42859 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.66□□□□□ -1.5
HttP42859 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.66□□□□□ -1.5
HttP42859 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HttP42859 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
HttP42859 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HttP42859 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HttP42859 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.66□□□□□ -1.5
HttP42859 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HttP42859 Gm7657-201ENSMUST00000118851 666 ntBASIC5.65□□□□□ -1.5
HttP42859 Gm13932-201ENSMUST00000120873 610 ntBASIC5.65□□□□□ -1.5
HttP42859 Gm22177-201ENSMUST00000175002 158 ntBASIC5.65□□□□□ -1.5
HttP42859 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.65□□□□□ -1.5
HttP42859 Gm44474-201ENSMUST00000196525 127 ntBASIC5.65□□□□□ -1.5
HttP42859 Gm6009-201ENSMUST00000210848 280 ntBASIC5.65□□□□□ -1.5
HttP42859 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.65□□□□□ -1.5
HttP42859 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.65□□□□□ -1.5
HttP42859 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HttP42859 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.65□□□□□ -1.5
HttP42859 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC5.65□□□□□ -1.5
HttP42859 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HttP42859 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.65□□□□□ -1.5
HttP42859 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.65□□□□□ -1.5
HttP42859 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HttP42859 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.65□□□□□ -1.51
HttP42859 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.51
HttP42859 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.65□□□□□ -1.51
HttP42859 Gm14845-201ENSMUST00000121259 306 ntBASIC5.65□□□□□ -1.51
HttP42859 Gm4842-201ENSMUST00000183237 835 ntBASIC5.65□□□□□ -1.51
HttP42859 Gm27492-201ENSMUST00000185194 187 ntBASIC5.65□□□□□ -1.51
HttP42859 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.65□□□□□ -1.51
HttP42859 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.65□□□□□ -1.51
HttP42859 Gm25592-201ENSMUST00000082635 131 ntBASIC5.65□□□□□ -1.51
HttP42859 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms