Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm13473-201ENSMUST00000119289 367 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Gm12303-201ENSMUST00000119506 673 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Gm22959-201ENSMUST00000122514 303 ntBASIC6.71□□□□□ -1.34
Traf1P39428 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Traf1P39428 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Traf1P39428 Gm28923-201ENSMUST00000187755 322 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Gm38015-201ENSMUST00000193048 188 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.71□□□□□ -1.34
Traf1P39428 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.71□□□□□ -1.34
Traf1P39428 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Traf1P39428 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC6.71□□□□□ -1.34
Traf1P39428 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.71□□□□□ -1.34
Traf1P39428 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.71□□□□□ -1.34
Traf1P39428 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.71□□□□□ -1.34
Traf1P39428 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.71□□□□□ -1.34
Traf1P39428 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Traf1P39428 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.71□□□□□ -1.34
Traf1P39428 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Traf1P39428 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Traf1P39428 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Traf1P39428 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.7□□□□□ -1.34
Traf1P39428 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm12901-201ENSMUST00000118690 532 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm11200-201ENSMUST00000121698 448 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Traf1P39428 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm27193-201ENSMUST00000184217 586 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm27887-201ENSMUST00000184367 102 ntBASIC6.7□□□□□ -1.34
Traf1P39428 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm19104-201ENSMUST00000198392 679 ntBASIC6.7□□□□□ -1.34
Traf1P39428 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.7□□□□□ -1.34
Traf1P39428 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm18940-201ENSMUST00000222518 871 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Gm5087-204ENSMUST00000225820 645 ntBASIC6.7□□□□□ -1.34
Traf1P39428 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Traf1P39428 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Traf1P39428 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Traf1P39428 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Traf1P39428 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Traf1P39428 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Traf1P39428 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Traf1P39428 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.7□□□□□ -1.34
Traf1P39428 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Traf1P39428 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.7□□□□□ -1.34
Traf1P39428 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Gm26067-201ENSMUST00000103789 110 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Gm24382-201ENSMUST00000122698 107 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Traf1P39428 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.69□□□□□ -1.34
Traf1P39428 Gm22361-201ENSMUST00000158435 176 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.69□□□□□ -1.34
Traf1P39428 Gm18953-201ENSMUST00000175694 300 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.69□□□□□ -1.34
Traf1P39428 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Gm19124-201ENSMUST00000191041 832 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Gm2429-201ENSMUST00000194635 586 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Traf1P39428 Gm8930-201ENSMUST00000201693 768 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Gm29781-201ENSMUST00000203862 478 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Gm45525-201ENSMUST00000210800 389 ntBASIC6.69□□□□□ -1.34
Traf1P39428 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.69□□□□□ -1.34
Traf1P39428 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.69□□□□□ -1.34
Traf1P39428 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.69□□□□□ -1.34
Traf1P39428 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Traf1P39428 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Traf1P39428 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Traf1P39428 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms