Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Gm14385-201ENSMUST00000116315 876 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm22710-201ENSMUST00000116892 125 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm14870-201ENSMUST00000118414 156 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Lire1P11260 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm15225-201ENSMUST00000120449 1017 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm12229-201ENSMUST00000120487 468 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm12890-201ENSMUST00000120885 373 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm26410-201ENSMUST00000157670 261 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm23071-201ENSMUST00000158242 115 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm23116-201ENSMUST00000158481 67 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm20432-201ENSMUST00000173716 250 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm26381-201ENSMUST00000174895 92 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Mir7211-201ENSMUST00000184071 63 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm29201-201ENSMUST00000189120 431 ntBASIC5.76□□□□□ -1.49
Lire1P11260 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm8860-201ENSMUST00000193160 445 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm19761-201ENSMUST00000205372 391 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm7499-201ENSMUST00000210423 813 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Gm3800-201ENSMUST00000221086 554 ntBASIC5.76□□□□□ -1.49
Lire1P11260 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Lire1P11260 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.76□□□□□ -1.49
Lire1P11260 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Lire1P11260 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.76□□□□□ -1.49
Lire1P11260 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Lire1P11260 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Lire1P11260 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Lire1P11260 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.75□□□□□ -1.49
Lire1P11260 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm15779-201ENSMUST00000117470 412 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm12099-201ENSMUST00000118660 750 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm12262-201ENSMUST00000119915 305 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm11498-201ENSMUST00000120660 949 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm25782-201ENSMUST00000122526 289 ntBASIC5.75□□□□□ -1.49
Lire1P11260 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Gm23441-201ENSMUST00000157268 127 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm26162-201ENSMUST00000157793 132 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm16318-201ENSMUST00000162402 601 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm9064-201ENSMUST00000163579 566 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm18833-201ENSMUST00000173218 862 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm6055-201ENSMUST00000180532 378 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Gm37581-201ENSMUST00000192371 988 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm38291-201ENSMUST00000193671 259 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm20926-201ENSMUST00000194457 696 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm42990-201ENSMUST00000199231 312 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm19039-201ENSMUST00000204363 575 ntBASIC5.75□□□□□ -1.49
Lire1P11260 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Lire1P11260 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.75□□□□□ -1.49
Lire1P11260 Gm45448-201ENSMUST00000211739 209 ntBASIC5.75□□□□□ -1.49
Lire1P11260 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.75□□□□□ -1.49
Lire1P11260 Gm9535-201ENSMUST00000218499 768 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms