Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm23224-201ENSMUST00000158122 271 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm21654-201ENSMUST00000188086 691 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm38185-201ENSMUST00000193195 694 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm18996-201ENSMUST00000214851 755 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm19186-201ENSMUST00000219922 333 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.08□□□□□ -1.44
Chmp6P0C0A3 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Mir711-201ENSMUST00000102188 82 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm6427-201ENSMUST00000118721 979 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm6884-201ENSMUST00000119318 615 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm12482-201ENSMUST00000120435 630 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm22993-201ENSMUST00000175423 254 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm8419-201ENSMUST00000189886 412 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm37375-201ENSMUST00000193859 387 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm37235-201ENSMUST00000195171 59 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm37385-201ENSMUST00000195223 387 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Mir6906-201ENSMUST00000198998 58 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm43798-201ENSMUST00000202056 394 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm4874-201ENSMUST00000203589 691 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Snora30-201ENSMUST00000083325 130 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Chmp6P0C0A3 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm43062-201ENSMUST00000196302 1319 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm26078-201ENSMUST00000104067 128 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm4989-201ENSMUST00000118711 749 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm16423-201ENSMUST00000120078 947 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm13024-201ENSMUST00000121756 718 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm26069-201ENSMUST00000157497 277 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm26372-201ENSMUST00000157831 236 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm23225-201ENSMUST00000158121 114 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm25227-201ENSMUST00000158204 112 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Gm6477-201ENSMUST00000217098 764 ntBASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Chmp6P0C0A3 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms