Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mir17-201ENSMUST00000083574 84 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col4a6B1AVK5 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Col4a6B1AVK5 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Fam35a-206ENSMUST00000228626 3100 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm10845-202ENSMUST00000228217 3389 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm23692-201ENSMUST00000101881 160 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm14485-201ENSMUST00000119489 493 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm26310-201ENSMUST00000157766 117 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Mir1945-201ENSMUST00000157919 78 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col4a6B1AVK5 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm6872-201ENSMUST00000165001 700 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Mir6899-201ENSMUST00000184798 64 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm2914-201ENSMUST00000186120 328 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm37882-201ENSMUST00000195254 196 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm34224-201ENSMUST00000204606 364 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm45405-201ENSMUST00000211544 609 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm44441-201ENSMUST00000203642 2475 ntBASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col4a6B1AVK5 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm22916-201ENSMUST00000157616 119 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm27760-201ENSMUST00000185048 114 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm34176-201ENSMUST00000192621 474 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm2607-201ENSMUST00000212389 627 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 AC153961.1-201ENSMUST00000217760 385 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm4963-201ENSMUST00000072718 378 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Gm23686-201ENSMUST00000083241 164 ntBASIC5.75□□□□□ -1.49
Col4a6B1AVK5 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms