Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm10319-202ENSMUST00000159439 846 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm21850-201ENSMUST00000179792 359 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm43919-201ENSMUST00000204303 364 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm9386-201ENSMUST00000095195 381 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 AC154841.1-201ENSMUST00000227263 1479 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm23513-201ENSMUST00000158181 133 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.72□□□□□ -1.65
Col6a4A2AX52 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Col6a4A2AX52 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a4A2AX52 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Col6a4A2AX52 Gm43788-201ENSMUST00000201539 2417 ntBASIC4.71□□□□□ -1.65
Col6a4A2AX52 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
Col6a4A2AX52 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm43728-201ENSMUST00000198817 2622 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm24125-201ENSMUST00000104105 137 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm23485-201ENSMUST00000104181 155 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm12293-201ENSMUST00000121898 590 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm2914-201ENSMUST00000186120 328 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm7042-201ENSMUST00000223027 384 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 AC152394.2-202ENSMUST00000228503 1064 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm44440-201ENSMUST00000203139 2373 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm11550-201ENSMUST00000118210 699 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm15171-201ENSMUST00000122191 334 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm16254-201ENSMUST00000131528 730 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm25271-201ENSMUST00000157273 290 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm29332-201ENSMUST00000190829 227 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC4.71□□□□□ -1.66
Col6a4A2AX52 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.71□□□□□ -1.66
Col6a4A2AX52 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Col6a4A2AX52 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col6a4A2AX52 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col6a4A2AX52 AC153729.1-201ENSMUST00000214055 2562 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms