Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.15□□□□□ -1.58
CtcflA2APF3 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CtcflA2APF3 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.15□□□□□ -1.58
CtcflA2APF3 Gm24272-201ENSMUST00000102329 98 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm25346-201ENSMUST00000104509 128 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm12442-201ENSMUST00000118372 338 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm12850-201ENSMUST00000119210 436 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm8312-201ENSMUST00000119380 618 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm6977-201ENSMUST00000121568 512 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.15□□□□□ -1.59
CtcflA2APF3 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm29124-201ENSMUST00000186576 452 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm18407-201ENSMUST00000192126 790 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm37196-201ENSMUST00000194762 906 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm18427-201ENSMUST00000195422 515 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm5694-201ENSMUST00000195648 641 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm22897-202ENSMUST00000197782 127 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.15□□□□□ -1.59
CtcflA2APF3 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm272-201ENSMUST00000222073 919 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm7117-201ENSMUST00000071515 387 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm22155-201ENSMUST00000083836 162 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CtcflA2APF3 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CtcflA2APF3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.15□□□□□ -1.59
CtcflA2APF3 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
CtcflA2APF3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm11271-201ENSMUST00000116054 440 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CtcflA2APF3 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm26557-201ENSMUST00000180756 493 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm28918-201ENSMUST00000188822 699 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm37135-201ENSMUST00000192652 534 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm38360-201ENSMUST00000195130 454 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CtcflA2APF3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm44163-201ENSMUST00000205140 475 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm33178-201ENSMUST00000212090 257 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC5.14□□□□□ -1.59
CtcflA2APF3 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.14□□□□□ -1.59
CtcflA2APF3 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm22351-201ENSMUST00000083925 107 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Gm24029-201ENSMUST00000083928 143 ntBASIC5.14□□□□□ -1.59
CtcflA2APF3 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CtcflA2APF3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms